HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5Gdeprec.c line 247 in H5Gcreate1(): unable to create group major: Symbol table minor: Unable to initialize object #001: H5G.c line 266 in H5G_create_named(): unable to create and link to group major: Symbol table minor: Unable to initialize object #002: H5L.c line 1639 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1862 in H5L_create_real(): can't insert link major: Symbol table minor: Unable to insert object #004: H5Gtraverse.c line 877 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 703 in H5G_traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1674 in H5L_link_cb(): name already exists major: Symbol table minor: Object already exists HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5Ddeprec.c line 154 in H5Dcreate1(): not a location ID major: Invalid arguments to routine minor: Inappropriate type #001: H5Gloc.c line 241 in H5G_loc(): invalid object ID major: Invalid arguments to routine minor: Bad value HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5Dio.c line 228 in H5Dwrite(): not a dataset major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5D.c line 378 in H5Dclose(): not a dataset major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5G.c line 694 in H5Gclose(): not a group major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5Gdeprec.c line 247 in H5Gcreate1(): unable to create group major: Symbol table minor: Unable to initialize object #001: H5G.c line 266 in H5G_create_named(): unable to create and link to group major: Symbol table minor: Unable to initialize object #002: H5L.c line 1639 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1862 in H5L_create_real(): can't insert link major: Symbol table minor: Unable to insert object #004: H5Gtraverse.c line 877 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 703 in H5G_traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1674 in H5L_link_cb(): name already exists major: Symbol table minor: Object already exists HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5Adeprec.c line 153 in H5Acreate1(): not a location major: Invalid arguments to routine minor: Inappropriate type #001: H5Gloc.c line 241 in H5G_loc(): invalid object ID major: Invalid arguments to routine minor: Bad value HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5A.c line 925 in H5Awrite(): not an attribute major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5A.c line 2283 in H5Aclose(): not an attribute major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5G.c line 694 in H5Gclose(): not a group major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5Gdeprec.c line 247 in H5Gcreate1(): unable to create group major: Symbol table minor: Unable to initialize object #001: H5G.c line 266 in H5G_create_named(): unable to create and link to group major: Symbol table minor: Unable to initialize object #002: H5L.c line 1639 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1862 in H5L_create_real(): can't insert link major: Symbol table minor: Unable to insert object #004: H5Gtraverse.c line 877 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 703 in H5G_traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1674 in H5L_link_cb(): name already exists major: Symbol table minor: Object already exists HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5Adeprec.c line 153 in H5Acreate1(): not a location major: Invalid arguments to routine minor: Inappropriate type #001: H5Gloc.c line 241 in H5G_loc(): invalid object ID major: Invalid arguments to routine minor: Bad value HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5A.c line 925 in H5Awrite(): not an attribute major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5A.c line 2283 in H5Aclose(): not an attribute major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5G.c line 694 in H5Gclose(): not a group major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5Gdeprec.c line 247 in H5Gcreate1(): unable to create group major: Symbol table minor: Unable to initialize object #001: H5G.c line 266 in H5G_create_named(): unable to create and link to group major: Symbol table minor: Unable to initialize object #002: H5L.c line 1639 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1862 in H5L_create_real(): can't insert link major: Symbol table minor: Unable to insert object #004: H5Gtraverse.c line 877 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 703 in H5G_traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1674 in H5L_link_cb(): name already exists major: Symbol table minor: Object already exists HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5Adeprec.c line 153 in H5Acreate1(): not a location major: Invalid arguments to routine minor: Inappropriate type #001: H5Gloc.c line 241 in H5G_loc(): invalid object ID major: Invalid arguments to routine minor: Bad value HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5A.c line 925 in H5Awrite(): not an attribute major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5A.c line 2283 in H5Aclose(): not an attribute major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5G.c line 694 in H5Gclose(): not a group major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5Gdeprec.c line 247 in H5Gcreate1(): unable to create group major: Symbol table minor: Unable to initialize object #001: H5G.c line 266 in H5G_create_named(): unable to create and link to group major: Symbol table minor: Unable to initialize object #002: H5L.c line 1639 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1862 in H5L_create_real(): can't insert link major: Symbol table minor: Unable to insert object #004: H5Gtraverse.c line 877 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 703 in H5G_traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1674 in H5L_link_cb(): name already exists major: Symbol table minor: Object already exists HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5Adeprec.c line 153 in H5Acreate1(): not a location major: Invalid arguments to routine minor: Inappropriate type #001: H5Gloc.c line 241 in H5G_loc(): invalid object ID major: Invalid arguments to routine minor: Bad value HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5A.c line 925 in H5Awrite(): not an attribute major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5A.c line 2283 in H5Aclose(): not an attribute major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5G.c line 694 in H5Gclose(): not a group major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5Adeprec.c line 165 in H5Acreate1(): unable to create attribute major: Attribute minor: Unable to initialize object #001: H5A.c line 386 in H5A_create(): error checking attributes major: Attribute minor: Object not found #002: H5Oattribute.c line 1823 in H5O_attr_exists(): error checking for existence of attribute major: Attribute minor: Iteration failed #003: H5Omessage.c line 1302 in H5O_msg_iterate_real(): unable to decode message major: Object header minor: Unable to decode value #004: H5Oshared.h line 85 in H5O_attr_shared_decode(): unable to decode native message major: Object header minor: Unable to decode value #005: H5Oattr.c line 148 in H5O_attr_decode(): bad version number for attribute message major: Attribute minor: Unable to load metadata into cache HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5A.c line 925 in H5Awrite(): not an attribute major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5A.c line 2283 in H5Aclose(): not an attribute major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5Adeprec.c line 165 in H5Acreate1(): unable to create attribute major: Attribute minor: Unable to initialize object #001: H5A.c line 386 in H5A_create(): error checking attributes major: Attribute minor: Object not found #002: H5Oattribute.c line 1823 in H5O_attr_exists(): error checking for existence of attribute major: Attribute minor: Iteration failed #003: H5Omessage.c line 1302 in H5O_msg_iterate_real(): unable to decode message major: Object header minor: Unable to decode value #004: H5Oshared.h line 85 in H5O_attr_shared_decode(): unable to decode native message major: Object header minor: Unable to decode value #005: H5Oattr.c line 148 in H5O_attr_decode(): bad version number for attribute message major: Attribute minor: Unable to load metadata into cache HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5A.c line 925 in H5Awrite(): not an attribute major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5A.c line 2283 in H5Aclose(): not an attribute major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5Adeprec.c line 165 in H5Acreate1(): unable to create attribute major: Attribute minor: Unable to initialize object #001: H5A.c line 386 in H5A_create(): error checking attributes major: Attribute minor: Object not found #002: H5Oattribute.c line 1823 in H5O_attr_exists(): error checking for existence of attribute major: Attribute minor: Iteration failed #003: H5Omessage.c line 1302 in H5O_msg_iterate_real(): unable to decode message major: Object header minor: Unable to decode value #004: H5Oshared.h line 85 in H5O_attr_shared_decode(): unable to decode native message major: Object header minor: Unable to decode value #005: H5Oattr.c line 148 in H5O_attr_decode(): bad version number for attribute message major: Attribute minor: Unable to load metadata into cache HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5A.c line 925 in H5Awrite(): not an attribute major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5A.c line 2283 in H5Aclose(): not an attribute major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5Adeprec.c line 165 in H5Acreate1(): unable to create attribute major: Attribute minor: Unable to initialize object #001: H5A.c line 386 in H5A_create(): error checking attributes major: Attribute minor: Object not found #002: H5Oattribute.c line 1823 in H5O_attr_exists(): error checking for existence of attribute major: Attribute minor: Iteration failed #003: H5Omessage.c line 1302 in H5O_msg_iterate_real(): unable to decode message major: Object header minor: Unable to decode value #004: H5Oshared.h line 85 in H5O_attr_shared_decode(): unable to decode native message major: Object header minor: Unable to decode value #005: H5Oattr.c line 148 in H5O_attr_decode(): bad version number for attribute message major: Attribute minor: Unable to load metadata into cache HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5A.c line 925 in H5Awrite(): not an attribute major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5A.c line 2283 in H5Aclose(): not an attribute major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5Gdeprec.c line 247 in H5Gcreate1(): unable to create group major: Symbol table minor: Unable to initialize object #001: H5G.c line 266 in H5G_create_named(): unable to create and link to group major: Symbol table minor: Unable to initialize object #002: H5L.c line 1639 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1862 in H5L_create_real(): can't insert link major: Symbol table minor: Unable to insert object #004: H5Gtraverse.c line 877 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 703 in H5G_traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1674 in H5L_link_cb(): name already exists major: Symbol table minor: Object already exists HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5Ddeprec.c line 154 in H5Dcreate1(): not a location ID major: Invalid arguments to routine minor: Inappropriate type #001: H5Gloc.c line 241 in H5G_loc(): invalid object ID major: Invalid arguments to routine minor: Bad value HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5Dio.c line 228 in H5Dwrite(): not a dataset major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5D.c line 378 in H5Dclose(): not a dataset major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5G.c line 694 in H5Gclose(): not a group major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5Gdeprec.c line 247 in H5Gcreate1(): unable to create group major: Symbol table minor: Unable to initialize object #001: H5G.c line 266 in H5G_create_named(): unable to create and link to group major: Symbol table minor: Unable to initialize object #002: H5L.c line 1639 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1862 in H5L_create_real(): can't insert link major: Symbol table minor: Unable to insert object #004: H5Gtraverse.c line 877 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 703 in H5G_traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1674 in H5L_link_cb(): name already exists major: Symbol table minor: Object already exists HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5Adeprec.c line 153 in H5Acreate1(): not a location major: Invalid arguments to routine minor: Inappropriate type #001: H5Gloc.c line 241 in H5G_loc(): invalid object ID major: Invalid arguments to routine minor: Bad value HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5A.c line 925 in H5Awrite(): not an attribute major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5A.c line 2283 in H5Aclose(): not an attribute major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5G.c line 694 in H5Gclose(): not a group major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5Gdeprec.c line 247 in H5Gcreate1(): unable to create group major: Symbol table minor: Unable to initialize object #001: H5G.c line 266 in H5G_create_named(): unable to create and link to group major: Symbol table minor: Unable to initialize object #002: H5L.c line 1639 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1862 in H5L_create_real(): can't insert link major: Symbol table minor: Unable to insert object #004: H5Gtraverse.c line 877 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 703 in H5G_traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1674 in H5L_link_cb(): name already exists major: Symbol table minor: Object already exists HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5Adeprec.c line 153 in H5Acreate1(): not a location major: Invalid arguments to routine minor: Inappropriate type #001: H5Gloc.c line 241 in H5G_loc(): invalid object ID major: Invalid arguments to routine minor: Bad value HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5A.c line 925 in H5Awrite(): not an attribute major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5A.c line 2283 in H5Aclose(): not an attribute major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5G.c line 694 in H5Gclose(): not a group major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5Gdeprec.c line 247 in H5Gcreate1(): unable to create group major: Symbol table minor: Unable to initialize object #001: H5G.c line 266 in H5G_create_named(): unable to create and link to group major: Symbol table minor: Unable to initialize object #002: H5L.c line 1639 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1862 in H5L_create_real(): can't insert link major: Symbol table minor: Unable to insert object #004: H5Gtraverse.c line 877 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 703 in H5G_traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1674 in H5L_link_cb(): name already exists major: Symbol table minor: Object already exists HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5Adeprec.c line 153 in H5Acreate1(): not a location major: Invalid arguments to routine minor: Inappropriate type #001: H5Gloc.c line 241 in H5G_loc(): invalid object ID major: Invalid arguments to routine minor: Bad value HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5A.c line 925 in H5Awrite(): not an attribute major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5A.c line 2283 in H5Aclose(): not an attribute major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5G.c line 694 in H5Gclose(): not a group major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5Gdeprec.c line 247 in H5Gcreate1(): unable to create group major: Symbol table minor: Unable to initialize object #001: H5G.c line 266 in H5G_create_named(): unable to create and link to group major: Symbol table minor: Unable to initialize object #002: H5L.c line 1639 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1862 in H5L_create_real(): can't insert link major: Symbol table minor: Unable to insert object #004: H5Gtraverse.c line 877 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 703 in H5G_traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1674 in H5L_link_cb(): name already exists major: Symbol table minor: Object already exists HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5Adeprec.c line 153 in H5Acreate1(): not a location major: Invalid arguments to routine minor: Inappropriate type #001: H5Gloc.c line 241 in H5G_loc(): invalid object ID major: Invalid arguments to routine minor: Bad value HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5A.c line 925 in H5Awrite(): not an attribute major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5A.c line 2283 in H5Aclose(): not an attribute major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5G.c line 694 in H5Gclose(): not a group major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5Ddeprec.c line 170 in H5Dcreate1(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 430 in H5D_create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1639 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1862 in H5L_create_real(): can't insert link major: Symbol table minor: Unable to insert object #004: H5Gtraverse.c line 877 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 665 in H5G_traverse_real(): can't look up component major: Symbol table minor: Object not found #006: H5Gobj.c line 1047 in H5G_obj_lookup(): can't locate object major: Symbol table minor: Object not found #007: H5Gstab.c line 860 in H5G_stab_lookup(): not found major: Symbol table minor: Object not found #008: H5B.c line 360 in H5B_find(): can't lookup key in leaf node major: B-Tree node minor: Object not found #009: H5Gnode.c line 522 in H5G_node_found(): unable to protect symbol table node major: Symbol table minor: Unable to load metadata into cache #010: H5AC.c line 1978 in H5AC_protect(): H5C_protect() failed. major: Object cache minor: Unable to protect metadata #011: H5C.c line 6202 in H5C_protect(): can't load entry major: Object cache minor: Unable to load metadata into cache #012: H5C.c line 11038 in H5C_load_entry(): unable to load entry major: Object cache minor: Unable to load metadata into cache #013: H5Gcache.c line 176 in H5G_node_load(): bad symbol table node signature major: Symbol table minor: Unable to load metadata into cache HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5Dio.c line 228 in H5Dwrite(): not a dataset major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5D.c line 378 in H5Dclose(): not a dataset major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5Gdeprec.c line 247 in H5Gcreate1(): unable to create group major: Symbol table minor: Unable to initialize object #001: H5G.c line 266 in H5G_create_named(): unable to create and link to group major: Symbol table minor: Unable to initialize object #002: H5L.c line 1639 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1862 in H5L_create_real(): can't insert link major: Symbol table minor: Unable to insert object #004: H5Gtraverse.c line 877 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 703 in H5G_traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1674 in H5L_link_cb(): name already exists major: Symbol table minor: Object already exists HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5Ddeprec.c line 154 in H5Dcreate1(): not a location ID major: Invalid arguments to routine minor: Inappropriate type #001: H5Gloc.c line 241 in H5G_loc(): invalid object ID major: Invalid arguments to routine minor: Bad value HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5Dio.c line 228 in H5Dwrite(): not a dataset major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5D.c line 378 in H5Dclose(): not a dataset major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5G.c line 694 in H5Gclose(): not a group major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5Gdeprec.c line 247 in H5Gcreate1(): unable to create group major: Symbol table minor: Unable to initialize object #001: H5G.c line 266 in H5G_create_named(): unable to create and link to group major: Symbol table minor: Unable to initialize object #002: H5L.c line 1639 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1862 in H5L_create_real(): can't insert link major: Symbol table minor: Unable to insert object #004: H5Gtraverse.c line 877 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 703 in H5G_traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1674 in H5L_link_cb(): name already exists major: Symbol table minor: Object already exists HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5Adeprec.c line 153 in H5Acreate1(): not a location major: Invalid arguments to routine minor: Inappropriate type #001: H5Gloc.c line 241 in H5G_loc(): invalid object ID major: Invalid arguments to routine minor: Bad value HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5A.c line 925 in H5Awrite(): not an attribute major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5A.c line 2283 in H5Aclose(): not an attribute major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5G.c line 694 in H5Gclose(): not a group major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5Gdeprec.c line 247 in H5Gcreate1(): unable to create group major: Symbol table minor: Unable to initialize object #001: H5G.c line 266 in H5G_create_named(): unable to create and link to group major: Symbol table minor: Unable to initialize object #002: H5L.c line 1639 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1862 in H5L_create_real(): can't insert link major: Symbol table minor: Unable to insert object #004: H5Gtraverse.c line 877 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 703 in H5G_traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1674 in H5L_link_cb(): name already exists major: Symbol table minor: Object already exists HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5Adeprec.c line 153 in H5Acreate1(): not a location major: Invalid arguments to routine minor: Inappropriate type #001: H5Gloc.c line 241 in H5G_loc(): invalid object ID major: Invalid arguments to routine minor: Bad value HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5A.c line 925 in H5Awrite(): not an attribute major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5A.c line 2283 in H5Aclose(): not an attribute major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5G.c line 694 in H5Gclose(): not a group major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5Gdeprec.c line 247 in H5Gcreate1(): unable to create group major: Symbol table minor: Unable to initialize object #001: H5G.c line 266 in H5G_create_named(): unable to create and link to group major: Symbol table minor: Unable to initialize object #002: H5L.c line 1639 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1862 in H5L_create_real(): can't insert link major: Symbol table minor: Unable to insert object #004: H5Gtraverse.c line 877 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 703 in H5G_traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1674 in H5L_link_cb(): name already exists major: Symbol table minor: Object already exists HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5Adeprec.c line 153 in H5Acreate1(): not a location major: Invalid arguments to routine minor: Inappropriate type #001: H5Gloc.c line 241 in H5G_loc(): invalid object ID major: Invalid arguments to routine minor: Bad value HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5A.c line 925 in H5Awrite(): not an attribute major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5A.c line 2283 in H5Aclose(): not an attribute major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5G.c line 694 in H5Gclose(): not a group major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5Gdeprec.c line 247 in H5Gcreate1(): unable to create group major: Symbol table minor: Unable to initialize object #001: H5G.c line 266 in H5G_create_named(): unable to create and link to group major: Symbol table minor: Unable to initialize object #002: H5L.c line 1639 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1862 in H5L_create_real(): can't insert link major: Symbol table minor: Unable to insert object #004: H5Gtraverse.c line 877 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 703 in H5G_traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1674 in H5L_link_cb(): name already exists major: Symbol table minor: Object already exists HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5Adeprec.c line 153 in H5Acreate1(): not a location major: Invalid arguments to routine minor: Inappropriate type #001: H5Gloc.c line 241 in H5G_loc(): invalid object ID major: Invalid arguments to routine minor: Bad value HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5A.c line 925 in H5Awrite(): not an attribute major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5A.c line 2283 in H5Aclose(): not an attribute major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.8.3) thread 0: #000: H5G.c line 694 in H5Gclose(): not a group major: Invalid arguments to routine minor: Inappropriate type forrtl: error (78): process killed (SIGTERM) Image PC Routine Line Source libpthread.so.0 0000003A02C0F30B Unknown Unknown Unknown libiomp5.so 00007F0E70B0FE8A Unknown Unknown Unknown forrtl: error (78): process killed (SIGTERM) Image PC Routine Line Source libpthread.so.0 0000003A02C0F30B Unknown Unknown Unknown libiomp5.so 00007F5D7C861E8A Unknown Unknown Unknown -------------------------------------------------------------------------- mpiexec has exited due to process rank 7 with PID 27071 on node gerbil exiting without calling "finalize". This may have caused other processes in the application to be terminated by signals sent by mpiexec (as reported here). -------------------------------------------------------------------------- forrtl: error (78): process killed (SIGTERM) Image PC Routine Line Source libpthread.so.0 0000003A02C0F30B Unknown Unknown Unknown libiomp5.so 00007FBBC9D41E8A Unknown Unknown Unknown forrtl: error (78): process killed (SIGTERM) Image PC Routine Line Source libpthread.so.0 0000003A02C0F30B Unknown Unknown Unknown libiomp5.so 00007FB63CA0EE8A Unknown Unknown Unknown forrtl: error (78): process killed (SIGTERM) Image PC Routine Line Source libpthread.so.0 0000003A02C0F30B Unknown Unknown Unknown libiomp5.so 00007F029D494E8A Unknown Unknown Unknown forrtl: error (78): process killed (SIGTERM) Image PC Routine Line Source libpthread.so.0 0000003A02C0F30B Unknown Unknown Unknown libiomp5.so 00007FD7D7B3EE8A Unknown Unknown Unknown forrtl: error (78): process killed (SIGTERM) Image PC Routine Line Source libpthread.so.0 0000003A02C0F30B Unknown Unknown Unknown libiomp5.so 00007F6B67D96E8A Unknown Unknown Unknown forrtl: error (78): process killed (SIGTERM) Image PC Routine Line Source libpthread.so.0 0000003A02C0F30B Unknown Unknown Unknown libiomp5.so 00007F05153B4E8A Unknown Unknown Unknown